Carnation DB

Dca1919.1

Annotation

19-exons
f-1
sp|B9GHQ7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1068795#GO:0005524;GO:0004672#2F0P0C
AT5G14720.1 | Symbols: | Protein kinase superfamily protein | chr5:4748212-4752642 REVERSE LENGTH=674
Repeat List (scaffold1062)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1919.1	5	656	665	68.12	652	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GHQ7_POPTR	6	686	694	98.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1919.1	5	656	665	63.15	652	62	0
Target_name	Start	End	Length	Cov(%)
AT5G14720.1	6	669	674	98.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1062	Augus-PASA	mRNA	20316	35161	.	-	.	ID=Dca1919.1;Parent=Dca1919
scaffold1062	Augus-PASA	exon	20316	20369	.	-	.	ID=Dca1919.1.exon1;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	22572	22623	.	-	.	ID=Dca1919.1.exon2;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	22720	22781	.	-	.	ID=Dca1919.1.exon3;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	24512	24558	.	-	.	ID=Dca1919.1.exon4;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	24651	24687	.	-	.	ID=Dca1919.1.exon5;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	24773	24886	.	-	.	ID=Dca1919.1.exon6;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	26301	26377	.	-	.	ID=Dca1919.1.exon7;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	27598	27911	.	-	.	ID=Dca1919.1.exon8;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	28897	28970	.	-	.	ID=Dca1919.1.exon9;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	29060	29179	.	-	.	ID=Dca1919.1.exon10;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	29326	29394	.	-	.	ID=Dca1919.1.exon11;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	30147	30212	.	-	.	ID=Dca1919.1.exon12;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	30473	30643	.	-	.	ID=Dca1919.1.exon13;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	30751	30819	.	-	.	ID=Dca1919.1.exon14;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	30899	30980	.	-	.	ID=Dca1919.1.exon15;Parent=Dca1919.1
scaffold1062	Augus-PASA	exon	31414	31458	.	-	.	ID=Dca1919.1.exon16;Parent=Dca1919.1
scaffold1062	Augustus	exon	31586	31710	.	-	.	ID=Dca1919.1.exon17;Parent=Dca1919.1
scaffold1062	Augustus	exon	32679	32933	.	-	.	ID=Dca1919.1.exon18;Parent=Dca1919.1
scaffold1062	Augustus	exon	34997	35161	.	-	.	ID=Dca1919.1.exon19;Parent=Dca1919.1