Carnation DB

Dca1922.1

Annotation

5-exons
f-1
sp|A5C9D7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_007304#GO:0003676;GO:0008270;GO:0015074#2F1P0C
sp|Q9AU17_SOLCI#Polyprotein-like#Solanum chilense (Tomato) (Lycopersicon chilense)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1062)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1922.1	48	358	370	40	311	38	2e-66
Target_name	Start	End	Length	Cov(%)
sp\|A5C9D7_VITVI	107	499	1362	28.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1922.1	166	359	370	19.72	194	31	5e-20
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	361	595	1428	16.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1062	Augustus	mRNA	54637	57591	.	+	.	ID=Dca1922.1;Parent=Dca1922
scaffold1062	Augustus	exon	54637	54667	.	+	.	ID=Dca1922.1.exon1;Parent=Dca1922.1
scaffold1062	Augustus	exon	55054	55166	.	+	.	ID=Dca1922.1.exon2;Parent=Dca1922.1
scaffold1062	Augustus	exon	56405	56672	.	+	.	ID=Dca1922.1.exon3;Parent=Dca1922.1
scaffold1062	Augustus	exon	56786	57130	.	+	.	ID=Dca1922.1.exon4;Parent=Dca1922.1
scaffold1062	Augustus	exon	57236	57591	.	+	.	ID=Dca1922.1.exon5;Parent=Dca1922.1