Carnation DB

Dca19266.1

Annotation

12-exons
f-1
sp|E0CV10_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g00570#unknown#0F0P0C
sp|B9RIX3_RICCO#Pectin acetylesterase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1583420#unknown#0F0P0C
Repeat List (scaffold20)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19266.1	1	366	367	71.66	366	72	6e-159
Target_name	Start	End	Length	Cov(%)
sp\|E0CV10_VITVI	28	391	394	92.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19266.1	1	366	367	65.12	366	65	1e-147
Target_name	Start	End	Length	Cov(%)
AT5G23870.3	37	402	451	81.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold20	Augus-PASA	mRNA	485425	492644	.	+	.	ID=Dca19266.1;Parent=Dca19266
scaffold20	Augus-PASA	exon	485425	485467	.	+	.	ID=Dca19266.1.exon1;Parent=Dca19266.1
scaffold20	Augus-PASA	exon	485704	485786	.	+	.	ID=Dca19266.1.exon2;Parent=Dca19266.1
scaffold20	Augus-PASA	exon	488458	488587	.	+	.	ID=Dca19266.1.exon3;Parent=Dca19266.1
scaffold20	Augus-PASA	exon	490409	490488	.	+	.	ID=Dca19266.1.exon4;Parent=Dca19266.1
scaffold20	Augus-PASA	exon	490620	490706	.	+	.	ID=Dca19266.1.exon5;Parent=Dca19266.1
scaffold20	Augustus	exon	490850	490974	.	+	.	ID=Dca19266.1.exon6;Parent=Dca19266.1
scaffold20	Augustus	exon	491055	491115	.	+	.	ID=Dca19266.1.exon7;Parent=Dca19266.1
scaffold20	Augustus	exon	491407	491463	.	+	.	ID=Dca19266.1.exon8;Parent=Dca19266.1
scaffold20	Augustus	exon	491560	491637	.	+	.	ID=Dca19266.1.exon9;Parent=Dca19266.1
scaffold20	Augustus	exon	491843	491948	.	+	.	ID=Dca19266.1.exon10;Parent=Dca19266.1
scaffold20	Augustus	exon	492095	492243	.	+	.	ID=Dca19266.1.exon11;Parent=Dca19266.1
scaffold20	Augustus	exon	492540	492644	.	+	.	ID=Dca19266.1.exon12;Parent=Dca19266.1