Carnation DB

Dca19302.1

Annotation

10-exons
f-1
sp|B9GVU9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_554268#GO:0016021;GO:0005524;GO:0004672#2F0P1C
AT1G12460.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4247703-4250444 FORWARD LENGTH=882
Repeat List (scaffold200)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19302.1	368	523	619	17.77	156	71	3e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9GVU9_POPTR	668	823	883	17.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19302.1	368	523	619	17.12	156	68	1e-55
Target_name	Start	End	Length	Cov(%)
AT1G12460.1	662	819	882	17.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold200	Augustus	mRNA	202419	208986	.	-	.	ID=Dca19302.1;Parent=Dca19302
scaffold200	Augustus	exon	202419	202499	.	-	.	ID=Dca19302.1.exon1;Parent=Dca19302.1
scaffold200	Augustus	exon	202603	202705	.	-	.	ID=Dca19302.1.exon2;Parent=Dca19302.1
scaffold200	Augustus	exon	202836	202942	.	-	.	ID=Dca19302.1.exon3;Parent=Dca19302.1
scaffold200	Augustus	exon	203731	204192	.	-	.	ID=Dca19302.1.exon4;Parent=Dca19302.1
scaffold200	Augustus	exon	204613	204701	.	-	.	ID=Dca19302.1.exon5;Parent=Dca19302.1
scaffold200	Augustus	exon	204876	205006	.	-	.	ID=Dca19302.1.exon6;Parent=Dca19302.1
scaffold200	Augustus	exon	205295	205435	.	-	.	ID=Dca19302.1.exon7;Parent=Dca19302.1
scaffold200	Augustus	exon	205552	206050	.	-	.	ID=Dca19302.1.exon8;Parent=Dca19302.1
scaffold200	Augustus	exon	206135	206214	.	-	.	ID=Dca19302.1.exon9;Parent=Dca19302.1
scaffold200	Augustus	exon	208820	208986	.	-	.	ID=Dca19302.1.exon10;Parent=Dca19302.1