Carnation DB

Dca19757.1

Annotation

12-exons
f-1
sp|A9PFC1_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#unknown#0F0P0C
AT3G56900.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:21066330-21069343 FORWARD LENGTH=447
Repeat List (scaffold2036)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19757.1	357	619	620	32.58	263	69	2e-116
Target_name	Start	End	Length	Cov(%)
sp\|A9PFC1_POPTR	134	429	449	65.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19757.1	357	619	620	30.96	263	65	3e-108
Target_name	Start	End	Length	Cov(%)
AT3G56900.1	130	427	447	66.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2036	Augustus	mRNA	18463	27953	.	+	.	ID=Dca19757.1;Parent=Dca19757
scaffold2036	Augustus	exon	18463	19199	.	+	.	ID=Dca19757.1.exon1;Parent=Dca19757.1
scaffold2036	Augustus	exon	20184	20301	.	+	.	ID=Dca19757.1.exon2;Parent=Dca19757.1
scaffold2036	Augustus	exon	20741	20863	.	+	.	ID=Dca19757.1.exon3;Parent=Dca19757.1
scaffold2036	Augustus	exon	21090	21186	.	+	.	ID=Dca19757.1.exon4;Parent=Dca19757.1
scaffold2036	Augustus	exon	22338	22437	.	+	.	ID=Dca19757.1.exon5;Parent=Dca19757.1
scaffold2036	Augustus	exon	22540	22679	.	+	.	ID=Dca19757.1.exon6;Parent=Dca19757.1
scaffold2036	Augustus	exon	24960	25047	.	+	.	ID=Dca19757.1.exon7;Parent=Dca19757.1
scaffold2036	Augustus	exon	25126	25201	.	+	.	ID=Dca19757.1.exon8;Parent=Dca19757.1
scaffold2036	Augustus	exon	25668	25767	.	+	.	ID=Dca19757.1.exon9;Parent=Dca19757.1
scaffold2036	Augustus	exon	25859	25910	.	+	.	ID=Dca19757.1.exon10;Parent=Dca19757.1
scaffold2036	Augustus	exon	26296	26433	.	+	.	ID=Dca19757.1.exon11;Parent=Dca19757.1
scaffold2036	Augustus	exon	27860	27953	.	+	.	ID=Dca19757.1.exon12;Parent=Dca19757.1