Carnation DB

Dca19833.1

Annotation

5-exons
f-1
sp|B9N4X4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_581505#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
Os05t0481400-01 Transcriptional factor B3 family protein.
Repeat List (scaffold2042)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19833.1	62	488	488	29.71	427	34	4e-54
Target_name	Start	End	Length	Cov(%)
sp\|B9N4X4_POPTR	98	476	476	79.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19833.1	70	161	488	7.99	92	43	7e-20
Target_name	Start	End	Length	Cov(%)
Os05t0481400-01	133	224	280	32.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2042	Augustus	mRNA	45827	50195	.	-	.	ID=Dca19833.1;Parent=Dca19833
scaffold2042	Augustus	exon	45827	46813	.	-	.	ID=Dca19833.1.exon1;Parent=Dca19833.1
scaffold2042	Augustus	exon	47137	47343	.	-	.	ID=Dca19833.1.exon2;Parent=Dca19833.1
scaffold2042	Augustus	exon	47454	47574	.	-	.	ID=Dca19833.1.exon3;Parent=Dca19833.1
scaffold2042	Augustus	exon	47660	47691	.	-	.	ID=Dca19833.1.exon4;Parent=Dca19833.1
scaffold2042	Augustus	exon	50076	50195	.	-	.	ID=Dca19833.1.exon5;Parent=Dca19833.1