Dca1996.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1065)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1996.1 |
49 |
405 |
405 |
61.48 |
357 |
69 |
2e-142
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
159 |
503 |
1307 |
26.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1996.1 |
268 |
385 |
405 |
13.58 |
118 |
47 |
7e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00300.1 |
27 |
141 |
145 |
79.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1065 |
Augustus |
mRNA |
32471 |
34219 |
. |
+ |
. |
ID=Dca1996.1;Parent=Dca1996 |
| scaffold1065 |
Augustus |
exon |
32471 |
32614 |
. |
+ |
. |
ID=Dca1996.1.exon1;Parent=Dca1996.1 |
| scaffold1065 |
Augustus |
exon |
33146 |
34219 |
. |
+ |
. |
ID=Dca1996.1.exon2;Parent=Dca1996.1 |
