Dca1997.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1065)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1997.1 |
1 |
320 |
321 |
82.55 |
320 |
77 |
2e-158
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
959 |
1306 |
1307 |
26.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1997.1 |
1 |
321 |
321 |
33.95 |
321 |
31 |
6e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1079 |
1422 |
1428 |
24.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1065 |
Augustus |
mRNA |
35604 |
36653 |
. |
+ |
. |
ID=Dca1997.1;Parent=Dca1997 |
| scaffold1065 |
Augustus |
exon |
35604 |
36279 |
. |
+ |
. |
ID=Dca1997.1.exon1;Parent=Dca1997.1 |
| scaffold1065 |
Augustus |
exon |
36364 |
36653 |
. |
+ |
. |
ID=Dca1997.1.exon2;Parent=Dca1997.1 |
