Dca1999.1
Annotation
- 3-exons
- f-1
- sp|B9P7E4_POPTR#Cc-nbs-lrr resistance protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_793256#GO:0043531;GO:0006952#1F1P0C
- Repeat List (scaffold1065)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1999.1 |
121 |
422 |
521 |
23.99 |
302 |
39 |
2e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9P7E4_POPTR |
243 |
555 |
605 |
51.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1999.1 |
1 |
125 |
521 |
8.06 |
125 |
32 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G35450.1 |
1 |
123 |
901 |
13.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1065 |
Augustus |
mRNA |
46597 |
48965 |
. |
- |
. |
ID=Dca1999.1;Parent=Dca1999 |
| scaffold1065 |
Augustus |
exon |
46597 |
47335 |
. |
- |
. |
ID=Dca1999.1.exon1;Parent=Dca1999.1 |
| scaffold1065 |
Augustus |
exon |
47456 |
47922 |
. |
- |
. |
ID=Dca1999.1.exon2;Parent=Dca1999.1 |
| scaffold1065 |
Augustus |
exon |
48606 |
48965 |
. |
- |
. |
ID=Dca1999.1.exon3;Parent=Dca1999.1 |
