Dca20120.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2066)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20120.1 |
6 |
587 |
587 |
44.97 |
582 |
43 |
2e-138
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
88 |
692 |
1313 |
46.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20120.1 |
238 |
587 |
587 |
19.08 |
350 |
30 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
290 |
662 |
1428 |
26.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2066 |
Augustus |
mRNA |
18536 |
20401 |
. |
+ |
. |
ID=Dca20120.1;Parent=Dca20120 |
| scaffold2066 |
Augustus |
exon |
18536 |
18798 |
. |
+ |
. |
ID=Dca20120.1.exon1;Parent=Dca20120.1 |
| scaffold2066 |
Augustus |
exon |
18901 |
20401 |
. |
+ |
. |
ID=Dca20120.1.exon2;Parent=Dca20120.1 |
