Carnation DB

Dca20556.1

Annotation

5-exons
f-1
sp|B9HR67_POPTR#Plant synaptotagmin#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=NTMC2T1.2#unknown#0F0P0C
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20556.1	119	159	206	16.01	41	81	1e-11
Target_name	Start	End	Length	Cov(%)
sp\|B9HR67_POPTR	128	168	523	7.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20556.1	120	159	206	15.53	40	80	1e-12
Target_name	Start	End	Length	Cov(%)
AT2G20990.3	129	168	579	6.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augustus	mRNA	323459	328611	.	-	.	ID=Dca20556.1;Parent=Dca20556
scaffold21	Augustus	exon	323459	323602	.	-	.	ID=Dca20556.1.exon1;Parent=Dca20556.1
scaffold21	Augustus	exon	325066	325184	.	-	.	ID=Dca20556.1.exon2;Parent=Dca20556.1
scaffold21	Augustus	exon	326538	326688	.	-	.	ID=Dca20556.1.exon3;Parent=Dca20556.1
scaffold21	Augustus	exon	328318	328396	.	-	.	ID=Dca20556.1.exon4;Parent=Dca20556.1
scaffold21	Augustus	exon	328484	328611	.	-	.	ID=Dca20556.1.exon5;Parent=Dca20556.1