Carnation DB

Dca20778.1

Annotation

8-exons
f-1
sp|B9GW95_POPTR#AP2 domain-containing transcription factor#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=RAP23#GO:0005634;GO:0003677;GO:0003700;GO:0006351#2F1P1C
Repeat List (scaffold211)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20778.1	1	384	477	58.7	384	72	2e-156
Target_name	Start	End	Length	Cov(%)
sp\|B9GW95_POPTR	1	354	524	67.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20778.1	386	477	477	8.17	92	42	4e-07
Target_name	Start	End	Length	Cov(%)
AT1G51190.1	491	568	568	13.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold211	Augustus	mRNA	163815	169761	.	+	.	ID=Dca20778.1;Parent=Dca20778
scaffold211	Augustus	exon	163815	163962	.	+	.	ID=Dca20778.1.exon1;Parent=Dca20778.1
scaffold211	Augustus	exon	164310	164769	.	+	.	ID=Dca20778.1.exon2;Parent=Dca20778.1
scaffold211	Augustus	exon	164942	165024	.	+	.	ID=Dca20778.1.exon3;Parent=Dca20778.1
scaffold211	Augustus	exon	165388	165476	.	+	.	ID=Dca20778.1.exon4;Parent=Dca20778.1
scaffold211	Augustus	exon	165650	165723	.	+	.	ID=Dca20778.1.exon5;Parent=Dca20778.1
scaffold211	Augustus	exon	165838	165965	.	+	.	ID=Dca20778.1.exon6;Parent=Dca20778.1
scaffold211	Augustus	exon	168084	168254	.	+	.	ID=Dca20778.1.exon7;Parent=Dca20778.1
scaffold211	Augustus	exon	169481	169761	.	+	.	ID=Dca20778.1.exon8;Parent=Dca20778.1