Dca20862.1
Annotation
- 4-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold21183)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20862.1 |
2 |
95 |
754 |
6.89 |
94 |
56 |
3e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
67 |
160 |
964 |
9.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20862.1 |
14 |
95 |
754 |
3.84 |
82 |
35 |
4e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
574 |
1428 |
5.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold21183 |
Augustus |
mRNA |
497 |
6414 |
. |
- |
. |
ID=Dca20862.1;Parent=Dca20862 |
| scaffold21183 |
Augustus |
exon |
497 |
1536 |
. |
- |
. |
ID=Dca20862.1.exon1;Parent=Dca20862.1 |
| scaffold21183 |
Augustus |
exon |
1771 |
2191 |
. |
- |
. |
ID=Dca20862.1.exon2;Parent=Dca20862.1 |
| scaffold21183 |
Augustus |
exon |
4779 |
5298 |
. |
- |
. |
ID=Dca20862.1.exon3;Parent=Dca20862.1 |
| scaffold21183 |
Augustus |
exon |
6131 |
6414 |
. |
- |
. |
ID=Dca20862.1.exon4;Parent=Dca20862.1 |
