Carnation DB

Dca21341.1

Annotation

8-exons
f-1
sp|B9HA56_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1081611#unknown#0F0P0C
AT4G32330.1 | Symbols: | TPX2 (targeting protein for Xklp2) protein family | chr4:15609801-15611867 FORWARD LENGTH=437
Repeat List (scaffold216)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21341.1	1	351	426	40.61	351	45	2e-64
Target_name	Start	End	Length	Cov(%)
sp\|B9HA56_POPTR	1	368	437	84.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21341.1	76	350	426	32.62	275	47	9e-55
Target_name	Start	End	Length	Cov(%)
AT4G32330.1	77	355	437	63.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold216	Augus-PASA	mRNA	59950	62820	.	-	.	ID=Dca21341.1;Parent=Dca21341
scaffold216	Augus-PASA	exon	59950	60360	.	-	.	ID=Dca21341.1.exon1;Parent=Dca21341.1
scaffold216	Augus-PASA	exon	61028	61135	.	-	.	ID=Dca21341.1.exon2;Parent=Dca21341.1
scaffold216	Augus-PASA	exon	61390	61461	.	-	.	ID=Dca21341.1.exon3;Parent=Dca21341.1
scaffold216	Augus-PASA	exon	61565	61655	.	-	.	ID=Dca21341.1.exon4;Parent=Dca21341.1
scaffold216	Augus-PASA	exon	61810	61881	.	-	.	ID=Dca21341.1.exon5;Parent=Dca21341.1
scaffold216	Augus-PASA	exon	61973	62031	.	-	.	ID=Dca21341.1.exon6;Parent=Dca21341.1
scaffold216	Augus-PASA	exon	62169	62429	.	-	.	ID=Dca21341.1.exon7;Parent=Dca21341.1
scaffold216	Augustus	exon	62614	62820	.	-	.	ID=Dca21341.1.exon8;Parent=Dca21341.1