Carnation DB

Dca21540.1

Annotation

7-exons
f-1
sp|F6HSQ5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0006g02600#GO:0005524;GO:0004674#2F0P0C
sp|B9SLZ8_RICCO#Wall-associated kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1310660#GO:0005524;GO:0004715#2F0P0C
Repeat List (scaffold2175)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21540.1	2	321	870	23.67	320	64	2e-116
Target_name	Start	End	Length	Cov(%)
sp\|F6HSQ5_VITVI	271	592	602	53.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21540.1	2	287	870	21.49	286	66	2e-110
Target_name	Start	End	Length	Cov(%)
AT1G18390.2	337	622	654	43.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2175	Augustus	mRNA	24993	29108	.	+	.	ID=Dca21540.1;Parent=Dca21540
scaffold2175	Augustus	exon	24993	25068	.	+	.	ID=Dca21540.1.exon1;Parent=Dca21540.1
scaffold2175	Augustus	exon	25195	26087	.	+	.	ID=Dca21540.1.exon2;Parent=Dca21540.1
scaffold2175	Augustus	exon	26908	27073	.	+	.	ID=Dca21540.1.exon3;Parent=Dca21540.1
scaffold2175	Augustus	exon	27379	27657	.	+	.	ID=Dca21540.1.exon4;Parent=Dca21540.1
scaffold2175	Augustus	exon	27741	27776	.	+	.	ID=Dca21540.1.exon5;Parent=Dca21540.1
scaffold2175	Augustus	exon	27859	28107	.	+	.	ID=Dca21540.1.exon6;Parent=Dca21540.1
scaffold2175	Augustus	exon	28195	29108	.	+	.	ID=Dca21540.1.exon7;Parent=Dca21540.1