Carnation DB

Dca21578.1

Annotation

5-exons
f-1
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold2179)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21578.1	35	325	403	27.79	291	31	1e-38
Target_name	Start	End	Length	Cov(%)
sp\|A2I5E5_BETVU	7	363	1501	23.78

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2179	Augustus	mRNA	35141	38467	.	+	.	ID=Dca21578.1;Parent=Dca21578
scaffold2179	Augustus	exon	35141	35196	.	+	.	ID=Dca21578.1.exon1;Parent=Dca21578.1
scaffold2179	Augustus	exon	35388	35432	.	+	.	ID=Dca21578.1.exon2;Parent=Dca21578.1
scaffold2179	Augustus	exon	36716	36896	.	+	.	ID=Dca21578.1.exon3;Parent=Dca21578.1
scaffold2179	Augustus	exon	36975	37668	.	+	.	ID=Dca21578.1.exon4;Parent=Dca21578.1
scaffold2179	Augustus	exon	38232	38467	.	+	.	ID=Dca21578.1.exon5;Parent=Dca21578.1