Carnation DB

Dca21882.1

Annotation

8-exons
f-1
sp|D7KB96_ARALL#ATP-dependent Clp protease proteolytic subunit#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_887394#GO:0004252;GO:0006508#1F1P0C
Repeat List (scaffold220)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21882.1	1	302	311	76.52	302	79	7e-134
Target_name	Start	End	Length	Cov(%)
sp\|D7KB96_ARALL	1	298	298	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21882.1	1	302	311	76.52	302	79	1e-134
Target_name	Start	End	Length	Cov(%)
AT1G02560.1	1	298	298	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold220	Augus-PASA	mRNA	67628	71309	.	+	.	ID=Dca21882.1;Parent=Dca21882
scaffold220	Augus-PASA	exon	67628	67770	.	+	.	ID=Dca21882.1.exon1;Parent=Dca21882.1
scaffold220	Augus-PASA	exon	68104	68223	.	+	.	ID=Dca21882.1.exon2;Parent=Dca21882.1
scaffold220	Augus-PASA	exon	69072	69186	.	+	.	ID=Dca21882.1.exon3;Parent=Dca21882.1
scaffold220	Augus-PASA	exon	69298	69390	.	+	.	ID=Dca21882.1.exon4;Parent=Dca21882.1
scaffold220	Augus-PASA	exon	69714	69759	.	+	.	ID=Dca21882.1.exon5;Parent=Dca21882.1
scaffold220	Augus-PASA	exon	69860	69932	.	+	.	ID=Dca21882.1.exon6;Parent=Dca21882.1
scaffold220	Augus-PASA	exon	70841	70964	.	+	.	ID=Dca21882.1.exon7;Parent=Dca21882.1
scaffold220	Augus-PASA	exon	71088	71309	.	+	.	ID=Dca21882.1.exon8;Parent=Dca21882.1