Carnation DB

Dca21887.1

Annotation

5-exons
f-1
sp|A9NNA8_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0016021;GO:0016192#0F1P1C
AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated membrane protein 726 | chr1:1334760-1336070 FORWARD LENGTH=220
Repeat List (scaffold220)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21887.1	1	221	221	83.71	221	84	4e-112
Target_name	Start	End	Length	Cov(%)
sp\|A9NNA8_PICSI	1	221	222	99.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21887.1	1	219	221	82.8	219	84	3e-106
Target_name	Start	End	Length	Cov(%)
AT1G04760.1	1	219	220	99.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold220	Augus-PASA	mRNA	106918	109751	.	-	.	ID=Dca21887.1;Parent=Dca21887
scaffold220	Augus-PASA	exon	106918	107067	.	-	.	ID=Dca21887.1.exon1;Parent=Dca21887.1
scaffold220	Augus-PASA	exon	107287	107349	.	-	.	ID=Dca21887.1.exon2;Parent=Dca21887.1
scaffold220	Augus-PASA	exon	107481	107601	.	-	.	ID=Dca21887.1.exon3;Parent=Dca21887.1
scaffold220	Augus-PASA	exon	107693	107834	.	-	.	ID=Dca21887.1.exon4;Parent=Dca21887.1
scaffold220	Augus-PASA	exon	109562	109751	.	-	.	ID=Dca21887.1.exon5;Parent=Dca21887.1