Dca22303.1
Annotation
- 3-exons
- f-1
- sp|D7SU98_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g03330#unknown#0F0P0C
- AT4G32910.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:15881364-15885210 FORWARD LENGTH=716
- Repeat List (scaffold22375)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22303.1 |
8 |
242 |
257 |
40.46 |
235 |
45 |
8e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7SU98_VITVI |
6 |
197 |
715 |
26.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22303.1 |
21 |
242 |
257 |
33.46 |
222 |
39 |
4e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G32910.1 |
19 |
197 |
716 |
25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold22375 |
Augustus |
mRNA |
255 |
1810 |
. |
+ |
. |
ID=Dca22303.1;Parent=Dca22303 |
| scaffold22375 |
Augustus |
exon |
255 |
631 |
. |
+ |
. |
ID=Dca22303.1.exon1;Parent=Dca22303.1 |
| scaffold22375 |
Augustus |
exon |
1293 |
1530 |
. |
+ |
. |
ID=Dca22303.1.exon2;Parent=Dca22303.1 |
| scaffold22375 |
Augustus |
exon |
1652 |
1810 |
. |
+ |
. |
ID=Dca22303.1.exon3;Parent=Dca22303.1 |
