Carnation DB

Dca22341.1

Annotation

6-exons
f-1
sp|B9MU68_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_590056#GO:0003950#1F0P0C
AT1G32230.1 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615894 FORWARD LENGTH=589
Repeat List (scaffold2240)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22341.1	1	579	593	42.15	579	41	3e-125
Target_name	Start	End	Length	Cov(%)
sp\|B9MU68_POPTR	1	611	623	98.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22341.1	1	592	593	38.11	592	37	3e-98
Target_name	Start	End	Length	Cov(%)
AT1G32230.1	1	586	589	99.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2240	Augustus	mRNA	29481	33731	.	-	.	ID=Dca22341.1;Parent=Dca22341
scaffold2240	Augustus	exon	29481	29537	.	-	.	ID=Dca22341.1.exon1;Parent=Dca22341.1
scaffold2240	Augustus	exon	30778	30873	.	-	.	ID=Dca22341.1.exon2;Parent=Dca22341.1
scaffold2240	Augustus	exon	30964	31149	.	-	.	ID=Dca22341.1.exon3;Parent=Dca22341.1
scaffold2240	Augustus	exon	31500	31600	.	-	.	ID=Dca22341.1.exon4;Parent=Dca22341.1
scaffold2240	Augustus	exon	31900	32141	.	-	.	ID=Dca22341.1.exon5;Parent=Dca22341.1
scaffold2240	Augustus	exon	32632	33731	.	-	.	ID=Dca22341.1.exon6;Parent=Dca22341.1