Carnation DB

Dca22771.1

Annotation

20-exons
f-1
sp|B9FMU5_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_17377#unknown#0F0P0C
Os01t0187400-01 Similar to glycine-rich protein.
Repeat List (scaffold228)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22771.1	40	1364	1365	59.85	1325	60	0
Target_name	Start	End	Length	Cov(%)
sp\|B9FMU5_ORYSJ	44	1382	1382	96.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22771.1	46	427	1365	19.26	382	69	3e-118
Target_name	Start	End	Length	Cov(%)
AT5G11700.2	50	430	1476	25.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold228	Augustus	mRNA	123797	134974	.	-	.	ID=Dca22771.1;Parent=Dca22771
scaffold228	Augustus	exon	123797	123944	.	-	.	ID=Dca22771.1.exon1;Parent=Dca22771.1
scaffold228	Augustus	exon	124103	124188	.	-	.	ID=Dca22771.1.exon2;Parent=Dca22771.1
scaffold228	Augustus	exon	124537	124779	.	-	.	ID=Dca22771.1.exon3;Parent=Dca22771.1
scaffold228	Augustus	exon	124870	125074	.	-	.	ID=Dca22771.1.exon4;Parent=Dca22771.1
scaffold228	Augustus	exon	125211	125500	.	-	.	ID=Dca22771.1.exon5;Parent=Dca22771.1
scaffold228	Augustus	exon	125622	125810	.	-	.	ID=Dca22771.1.exon6;Parent=Dca22771.1
scaffold228	Augustus	exon	126102	126336	.	-	.	ID=Dca22771.1.exon7;Parent=Dca22771.1
scaffold228	Augustus	exon	126424	126551	.	-	.	ID=Dca22771.1.exon8;Parent=Dca22771.1
scaffold228	Augustus	exon	126818	127089	.	-	.	ID=Dca22771.1.exon9;Parent=Dca22771.1
scaffold228	Augustus	exon	127182	127290	.	-	.	ID=Dca22771.1.exon10;Parent=Dca22771.1
scaffold228	Augustus	exon	127824	127917	.	-	.	ID=Dca22771.1.exon11;Parent=Dca22771.1
scaffold228	Augustus	exon	128217	128544	.	-	.	ID=Dca22771.1.exon12;Parent=Dca22771.1
scaffold228	Augustus	exon	129194	129403	.	-	.	ID=Dca22771.1.exon13;Parent=Dca22771.1
scaffold228	Augustus	exon	129654	129771	.	-	.	ID=Dca22771.1.exon14;Parent=Dca22771.1
scaffold228	Augustus	exon	129852	129960	.	-	.	ID=Dca22771.1.exon15;Parent=Dca22771.1
scaffold228	Augustus	exon	130046	130101	.	-	.	ID=Dca22771.1.exon16;Parent=Dca22771.1
scaffold228	Augustus	exon	132219	132338	.	-	.	ID=Dca22771.1.exon17;Parent=Dca22771.1
scaffold228	Augustus	exon	132619	132827	.	-	.	ID=Dca22771.1.exon18;Parent=Dca22771.1
scaffold228	Augustus	exon	133546	133661	.	-	.	ID=Dca22771.1.exon19;Parent=Dca22771.1
scaffold228	Augustus	exon	134142	134974	.	-	.	ID=Dca22771.1.exon20;Parent=Dca22771.1