Carnation DB

Dca22778.1

Annotation

9-exons
f-1
sp|B5M1Y3_RHEAU#Putative uncharacterized protein#Rheum australe (Himalayan rhubarb) (Rheum emodi)#unknown#unknown#0F0P0C
sp|G7ILW3_MEDTR#Thioredoxin family protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g018310#unknown#0F0P0C
Repeat List (scaffold228)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22778.1	1	204	204	88.72	204	89	3e-109
Target_name	Start	End	Length	Cov(%)
sp\|B5M1Y3_RHEAU	1	204	204	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22778.1	1	204	204	81.86	204	82	5e-102
Target_name	Start	End	Length	Cov(%)
Os01t0559000-01	1	204	205	99.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold228	Augustus	mRNA	198882	201813	.	+	.	ID=Dca22778.1;Parent=Dca22778
scaffold228	Augustus	exon	198882	198965	.	+	.	ID=Dca22778.1.exon1;Parent=Dca22778.1
scaffold228	Augustus	exon	200050	200130	.	+	.	ID=Dca22778.1.exon2;Parent=Dca22778.1
scaffold228	Augustus	exon	200271	200320	.	+	.	ID=Dca22778.1.exon3;Parent=Dca22778.1
scaffold228	Augustus	exon	200400	200477	.	+	.	ID=Dca22778.1.exon4;Parent=Dca22778.1
scaffold228	Augustus	exon	200691	200748	.	+	.	ID=Dca22778.1.exon5;Parent=Dca22778.1
scaffold228	Augustus	exon	200860	200909	.	+	.	ID=Dca22778.1.exon6;Parent=Dca22778.1
scaffold228	Augustus	exon	201011	201119	.	+	.	ID=Dca22778.1.exon7;Parent=Dca22778.1
scaffold228	Augustus	exon	201230	201291	.	+	.	ID=Dca22778.1.exon8;Parent=Dca22778.1
scaffold228	Augustus	exon	201771	201813	.	+	.	ID=Dca22778.1.exon9;Parent=Dca22778.1