Dca22825.1
Annotation
- 3-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2286)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22825.1 |
14 |
114 |
116 |
49.13 |
101 |
44 |
2e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
1202 |
1332 |
1333 |
9.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22825.1 |
13 |
104 |
116 |
34.48 |
92 |
32 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1270 |
1391 |
1401 |
8.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2286 |
Augustus |
mRNA |
7562 |
8113 |
. |
- |
. |
ID=Dca22825.1;Parent=Dca22825 |
| scaffold2286 |
Augustus |
exon |
7562 |
7721 |
. |
- |
. |
ID=Dca22825.1.exon1;Parent=Dca22825.1 |
| scaffold2286 |
Augustus |
exon |
7816 |
7966 |
. |
- |
. |
ID=Dca22825.1.exon2;Parent=Dca22825.1 |
| scaffold2286 |
Augustus |
exon |
8074 |
8113 |
. |
- |
. |
ID=Dca22825.1.exon3;Parent=Dca22825.1 |
