Carnation DB

Dca22978.1

Annotation

9-exons
f-1
sp|F6I499_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0062g01060#unknown#0F0P0C
AT5G56190.2 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:22742654-22744909 FORWARD LENGTH=447
Repeat List (scaffold2299)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22978.1	8	443	443	75.62	436	77	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I499_VITVI	28	463	463	94.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22978.1	10	443	443	63.2	434	65	3e-174
Target_name	Start	End	Length	Cov(%)
AT5G56190.2	12	447	447	97.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2299	Augustus	mRNA	26908	30110	.	+	.	ID=Dca22978.1;Parent=Dca22978
scaffold2299	Augustus	exon	26908	27039	.	+	.	ID=Dca22978.1.exon1;Parent=Dca22978.1
scaffold2299	Augustus	exon	27153	27320	.	+	.	ID=Dca22978.1.exon2;Parent=Dca22978.1
scaffold2299	Augustus	exon	27422	27508	.	+	.	ID=Dca22978.1.exon3;Parent=Dca22978.1
scaffold2299	Augustus	exon	27872	28006	.	+	.	ID=Dca22978.1.exon4;Parent=Dca22978.1
scaffold2299	Augustus	exon	28139	28249	.	+	.	ID=Dca22978.1.exon5;Parent=Dca22978.1
scaffold2299	Augustus	exon	28963	29054	.	+	.	ID=Dca22978.1.exon6;Parent=Dca22978.1
scaffold2299	Augustus	exon	29132	29237	.	+	.	ID=Dca22978.1.exon7;Parent=Dca22978.1
scaffold2299	Augustus	exon	29527	29613	.	+	.	ID=Dca22978.1.exon8;Parent=Dca22978.1
scaffold2299	Augustus	exon	29697	30110	.	+	.	ID=Dca22978.1.exon9;Parent=Dca22978.1