Carnation DB

Dca23058.1

Annotation

18-exons
f-1
sp|F6I1A7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g00110#GO:0003676;GO:0000166#2F0P0C
AT2G21440.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:9173712-9179065 REVERSE LENGTH=1003
Repeat List (scaffold230)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23058.1	308	404	759	5.13	97	41	1e-06
Target_name	Start	End	Length	Cov(%)
sp\|F6I1A7_VITVI	73	165	953	9.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23058.1	470	573	759	4.47	104	33	3e-07
Target_name	Start	End	Length	Cov(%)
AT2G21440.1	22	124	1003	10.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold230	Augustus	mRNA	45785	54212	.	+	.	ID=Dca23058.1;Parent=Dca23058
scaffold230	Augustus	exon	45785	45814	.	+	.	ID=Dca23058.1.exon1;Parent=Dca23058.1
scaffold230	Augustus	exon	45937	45992	.	+	.	ID=Dca23058.1.exon2;Parent=Dca23058.1
scaffold230	Augustus	exon	46105	46162	.	+	.	ID=Dca23058.1.exon3;Parent=Dca23058.1
scaffold230	Augustus	exon	47179	47212	.	+	.	ID=Dca23058.1.exon4;Parent=Dca23058.1
scaffold230	Augustus	exon	47367	47590	.	+	.	ID=Dca23058.1.exon5;Parent=Dca23058.1
scaffold230	Augustus	exon	47671	47731	.	+	.	ID=Dca23058.1.exon6;Parent=Dca23058.1
scaffold230	Augustus	exon	47878	47969	.	+	.	ID=Dca23058.1.exon7;Parent=Dca23058.1
scaffold230	Augustus	exon	48057	48344	.	+	.	ID=Dca23058.1.exon8;Parent=Dca23058.1
scaffold230	Augustus	exon	48811	48873	.	+	.	ID=Dca23058.1.exon9;Parent=Dca23058.1
scaffold230	Augustus	exon	50289	50418	.	+	.	ID=Dca23058.1.exon10;Parent=Dca23058.1
scaffold230	Augustus	exon	50557	50646	.	+	.	ID=Dca23058.1.exon11;Parent=Dca23058.1
scaffold230	Augustus	exon	50749	50910	.	+	.	ID=Dca23058.1.exon12;Parent=Dca23058.1
scaffold230	Augustus	exon	51011	51104	.	+	.	ID=Dca23058.1.exon13;Parent=Dca23058.1
scaffold230	Augustus	exon	52713	52764	.	+	.	ID=Dca23058.1.exon14;Parent=Dca23058.1
scaffold230	Augustus	exon	52869	52951	.	+	.	ID=Dca23058.1.exon15;Parent=Dca23058.1
scaffold230	Augustus	exon	53041	53095	.	+	.	ID=Dca23058.1.exon16;Parent=Dca23058.1
scaffold230	Augustus	exon	53189	53297	.	+	.	ID=Dca23058.1.exon17;Parent=Dca23058.1
scaffold230	Augustus	exon	53614	54212	.	+	.	ID=Dca23058.1.exon18;Parent=Dca23058.1