Carnation DB

Dca23372.1

Annotation

5-exons
f-1
sp|B9I4P9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_814302#GO:0003677;GO:0032542#2F0P0C
AT1G31170.4 | Symbols: SRX | sulfiredoxin | chr1:11133521-11134686 FORWARD LENGTH=198
Repeat List (scaffold233)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23372.1	1	120	120	82.5	120	80	5e-51
Target_name	Start	End	Length	Cov(%)
sp\|B9I4P9_POPTR	1	125	125	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23372.1	14	120	120	70.83	107	76	1e-45
Target_name	Start	End	Length	Cov(%)
Os06t0174300-01	44	154	155	71.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold233	Augus-PASA	mRNA	171778	172645	.	+	.	ID=Dca23372.1;Parent=Dca23372
scaffold233	Augus-PASA	exon	171778	171844	.	+	.	ID=Dca23372.1.exon1;Parent=Dca23372.1
scaffold233	Augus-PASA	exon	171936	172087	.	+	.	ID=Dca23372.1.exon2;Parent=Dca23372.1
scaffold233	Augus-PASA	exon	172225	172258	.	+	.	ID=Dca23372.1.exon3;Parent=Dca23372.1
scaffold233	Augus-PASA	exon	172431	172524	.	+	.	ID=Dca23372.1.exon4;Parent=Dca23372.1
scaffold233	Augus-PASA	exon	172630	172645	.	+	.	ID=Dca23372.1.exon5;Parent=Dca23372.1