Carnation DB

Dca23476.1

Annotation

7-exons
f-1
sp|D7LE24_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_481121#GO:0030246;GO:0003824;GO:0005975#2F1P0C
AT2G22620.1 | Symbols: | Rhamnogalacturonate lyase family protein | chr2:9604902-9610156 REVERSE LENGTH=677
Repeat List (scaffold2344)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23476.1	1	379	382	58.37	379	59	1e-130
Target_name	Start	End	Length	Cov(%)
sp\|D7LE24_ARALL	304	678	681	55.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23476.1	1	379	382	58.37	379	59	8e-131
Target_name	Start	End	Length	Cov(%)
AT2G22620.1	300	674	677	55.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2344	Augustus	mRNA	20084	22006	.	-	.	ID=Dca23476.1;Parent=Dca23476
scaffold2344	Augustus	exon	20084	20326	.	-	.	ID=Dca23476.1.exon1;Parent=Dca23476.1
scaffold2344	Augustus	exon	20456	20696	.	-	.	ID=Dca23476.1.exon2;Parent=Dca23476.1
scaffold2344	Augustus	exon	20811	20970	.	-	.	ID=Dca23476.1.exon3;Parent=Dca23476.1
scaffold2344	Augustus	exon	21148	21289	.	-	.	ID=Dca23476.1.exon4;Parent=Dca23476.1
scaffold2344	Augustus	exon	21403	21487	.	-	.	ID=Dca23476.1.exon5;Parent=Dca23476.1
scaffold2344	Augustus	exon	21625	21731	.	-	.	ID=Dca23476.1.exon6;Parent=Dca23476.1
scaffold2344	Augustus	exon	21836	22006	.	-	.	ID=Dca23476.1.exon7;Parent=Dca23476.1