Dca23680.1
Annotation
- 3-exons
- f-1
- sp|B9GN10_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_797242#GO:0005509#1F0P0C
- AT4G20110.2 | Symbols: VSR7 | VACUOLAR SORTING RECEPTOR 7 | chr4:10875567-10878545 FORWARD LENGTH=628
- Repeat List (scaffold2365)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23680.1 |
194 |
330 |
331 |
30.81 |
137 |
75 |
3e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GN10_POPTR |
111 |
247 |
642 |
21.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23680.1 |
194 |
330 |
331 |
29.9 |
137 |
73 |
2e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G20110.2 |
110 |
246 |
628 |
21.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2365 |
Augustus |
mRNA |
19594 |
21016 |
. |
+ |
. |
ID=Dca23680.1;Parent=Dca23680 |
| scaffold2365 |
Augustus |
exon |
19594 |
19774 |
. |
+ |
. |
ID=Dca23680.1.exon1;Parent=Dca23680.1 |
| scaffold2365 |
Augustus |
exon |
19848 |
20254 |
. |
+ |
. |
ID=Dca23680.1.exon2;Parent=Dca23680.1 |
| scaffold2365 |
Augustus |
exon |
20609 |
21016 |
. |
+ |
. |
ID=Dca23680.1.exon3;Parent=Dca23680.1 |
