Dca23917.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold23882)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23917.1 |
234 |
787 |
787 |
38.75 |
554 |
52 |
1e-170
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
187 |
774 |
1501 |
39.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23917.1 |
383 |
787 |
787 |
19.82 |
405 |
38 |
1e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
463 |
707 |
57.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold23882 |
Augustus |
mRNA |
354 |
6437 |
. |
+ |
. |
ID=Dca23917.1;Parent=Dca23917 |
| scaffold23882 |
Augustus |
exon |
354 |
423 |
. |
+ |
. |
ID=Dca23917.1.exon1;Parent=Dca23917.1 |
| scaffold23882 |
Augustus |
exon |
779 |
1416 |
. |
+ |
. |
ID=Dca23917.1.exon2;Parent=Dca23917.1 |
| scaffold23882 |
Augustus |
exon |
4783 |
6437 |
. |
+ |
. |
ID=Dca23917.1.exon3;Parent=Dca23917.1 |
