Carnation DB

Dca24541.1

Annotation

20-exons
f-1
sp|D7SHB2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g10130#unknown#0F0P0C
AT5G50310.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr5:20474562-20479281 FORWARD LENGTH=666
Repeat List (scaffold244)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24541.1	26	661	663	73.45	636	74	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SHB2_VITVI	26	678	682	95.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24541.1	15	658	663	72.24	644	73	0
Target_name	Start	End	Length	Cov(%)
AT5G50310.1	15	665	666	97.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold244	Augus-PASA	mRNA	84672	90819	.	-	.	ID=Dca24541.1;Parent=Dca24541
scaffold244	Augus-PASA	exon	84672	84782	.	-	.	ID=Dca24541.1.exon1;Parent=Dca24541.1
scaffold244	Augus-PASA	exon	84912	84980	.	-	.	ID=Dca24541.1.exon2;Parent=Dca24541.1
scaffold244	Augus-PASA	exon	85255	85341	.	-	.	ID=Dca24541.1.exon3;Parent=Dca24541.1
scaffold244	Augustus	exon	85441	85584	.	-	.	ID=Dca24541.1.exon4;Parent=Dca24541.1
scaffold244	Augustus	exon	85679	85822	.	-	.	ID=Dca24541.1.exon5;Parent=Dca24541.1
scaffold244	Augustus	exon	85916	86077	.	-	.	ID=Dca24541.1.exon6;Parent=Dca24541.1
scaffold244	Augustus	exon	86166	86366	.	-	.	ID=Dca24541.1.exon7;Parent=Dca24541.1
scaffold244	Augustus	exon	86601	86643	.	-	.	ID=Dca24541.1.exon8;Parent=Dca24541.1
scaffold244	Augustus	exon	87002	87065	.	-	.	ID=Dca24541.1.exon9;Parent=Dca24541.1
scaffold244	Augustus	exon	87629	87734	.	-	.	ID=Dca24541.1.exon10;Parent=Dca24541.1
scaffold244	Augustus	exon	87956	88075	.	-	.	ID=Dca24541.1.exon11;Parent=Dca24541.1
scaffold244	Augustus	exon	88466	88546	.	-	.	ID=Dca24541.1.exon12;Parent=Dca24541.1
scaffold244	Augustus	exon	88690	88732	.	-	.	ID=Dca24541.1.exon13;Parent=Dca24541.1
scaffold244	Augustus	exon	89022	89083	.	-	.	ID=Dca24541.1.exon14;Parent=Dca24541.1
scaffold244	Augustus	exon	89227	89313	.	-	.	ID=Dca24541.1.exon15;Parent=Dca24541.1
scaffold244	Augustus	exon	89423	89469	.	-	.	ID=Dca24541.1.exon16;Parent=Dca24541.1
scaffold244	Augustus	exon	89574	89706	.	-	.	ID=Dca24541.1.exon17;Parent=Dca24541.1
scaffold244	Augustus	exon	89808	89876	.	-	.	ID=Dca24541.1.exon18;Parent=Dca24541.1
scaffold244	Augustus	exon	89972	90058	.	-	.	ID=Dca24541.1.exon19;Parent=Dca24541.1
scaffold244	Augustus	exon	90688	90819	.	-	.	ID=Dca24541.1.exon20;Parent=Dca24541.1