Carnation DB

Dca24788.1

Annotation

5-exons
f-1
sp|B9RKC1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1048170#unknown#0F0P0C
AT2G19710.1 | Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr2:8506339-8509817 FORWARD LENGTH=937
Repeat List (scaffold2465)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24788.1	1	179	226	60.17	179	76	2e-77
Target_name	Start	End	Length	Cov(%)
sp\|B9RKC1_RICCO	1	179	1155	15.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24788.1	1	194	226	51.32	194	60	4e-70
Target_name	Start	End	Length	Cov(%)
Os01t0706400-01	11	204	1102	17.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2465	Augustus	mRNA	46767	49067	.	-	.	ID=Dca24788.1;Parent=Dca24788
scaffold2465	Augustus	exon	46767	47006	.	-	.	ID=Dca24788.1.exon1;Parent=Dca24788.1
scaffold2465	Augustus	exon	47147	47318	.	-	.	ID=Dca24788.1.exon2;Parent=Dca24788.1
scaffold2465	Augustus	exon	47922	48025	.	-	.	ID=Dca24788.1.exon3;Parent=Dca24788.1
scaffold2465	Augustus	exon	48756	48888	.	-	.	ID=Dca24788.1.exon4;Parent=Dca24788.1
scaffold2465	Augustus	exon	49036	49067	.	-	.	ID=Dca24788.1.exon5;Parent=Dca24788.1