Dca25080.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2495)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25080.1 |
1 |
630 |
661 |
63.99 |
630 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
583 |
1293 |
1501 |
47.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25080.1 |
1 |
625 |
661 |
36.61 |
625 |
35 |
5e-113
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
613 |
1281 |
1539 |
43.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2495 |
Augustus |
mRNA |
24413 |
26635 |
. |
- |
. |
ID=Dca25080.1;Parent=Dca25080 |
| scaffold2495 |
Augustus |
exon |
24413 |
25552 |
. |
- |
. |
ID=Dca25080.1.exon1;Parent=Dca25080.1 |
| scaffold2495 |
Augustus |
exon |
25637 |
25921 |
. |
- |
. |
ID=Dca25080.1.exon2;Parent=Dca25080.1 |
| scaffold2495 |
Augustus |
exon |
26075 |
26635 |
. |
- |
. |
ID=Dca25080.1.exon3;Parent=Dca25080.1 |
