Dca25134.1
Annotation
- 2-exons
- f-1
- sp|F6H5V8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0108g01160#unknown#0F0P0C
- AT5G39570.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:15844021-15845827 FORWARD LENGTH=381
- Repeat List (scaffold25)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25134.1 |
11 |
390 |
390 |
50.25 |
380 |
49 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H5V8_VITVI |
7 |
382 |
383 |
98.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25134.1 |
21 |
376 |
390 |
40 |
356 |
42 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G39570.1 |
18 |
362 |
381 |
90.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold25 |
Augus-PASA |
mRNA |
27402 |
29442 |
. |
+ |
. |
ID=Dca25134.1;Parent=Dca25134 |
| scaffold25 |
Augus-PASA |
exon |
27402 |
28499 |
. |
+ |
. |
ID=Dca25134.1.exon1;Parent=Dca25134.1 |
| scaffold25 |
Augus-PASA |
exon |
29368 |
29442 |
. |
+ |
. |
ID=Dca25134.1.exon2;Parent=Dca25134.1 |
