Carnation DB

Dca25246.1

Annotation

6-exons
f-1
sp|D7MKM9_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_496347#GO:0005783;GO:0016021;GO:0005509;GO:0051082;GO:0006457;GO:0006810#2F2P2C
AT5G61790.1 | Symbols: CNX1, ATCNX1 | calnexin 1 | chr5:24827394-24829642 REVERSE LENGTH=530
Repeat List (scaffold2504)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25246.1	33	539	539	73.46	507	78	0
Target_name	Start	End	Length	Cov(%)
sp\|D7MKM9_ARALL	902	1401	1401	35.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25246.1	8	539	539	74.58	532	76	0
Target_name	Start	End	Length	Cov(%)
AT5G61790.1	4	530	530	99.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2504	Augus-PASA	mRNA	32687	36001	.	-	.	ID=Dca25246.1;Parent=Dca25246
scaffold2504	Augus-PASA	exon	32687	32824	.	-	.	ID=Dca25246.1.exon1;Parent=Dca25246.1
scaffold2504	Augus-PASA	exon	33311	33424	.	-	.	ID=Dca25246.1.exon2;Parent=Dca25246.1
scaffold2504	Augus-PASA	exon	33512	33583	.	-	.	ID=Dca25246.1.exon3;Parent=Dca25246.1
scaffold2504	Augus-PASA	exon	33671	34800	.	-	.	ID=Dca25246.1.exon4;Parent=Dca25246.1
scaffold2504	Augus-PASA	exon	35731	35800	.	-	.	ID=Dca25246.1.exon5;Parent=Dca25246.1
scaffold2504	Augus-PASA	exon	35906	36001	.	-	.	ID=Dca25246.1.exon6;Parent=Dca25246.1