Carnation DB

Dca25300.1

Annotation

6-exons
f-442
sp|E7BQD5_SILLA#Gag-pol polyprotein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold251)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25300.1	18	1116	1800	37.77	1099	62	0
Target_name	Start	End	Length	Cov(%)
sp\|E7BQD5_SILLA	355	1441	1475	73.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25300.1	57	1104	1800	21.61	1048	37	0
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	419	1410	1539	64.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold251	Augustus	mRNA	106827	114816	.	-	.	ID=Dca25300.1;Parent=Dca25300
scaffold251	Augustus	exon	106827	107432	.	-	.	ID=Dca25300.1.exon1;Parent=Dca25300.1
scaffold251	Augustus	exon	107517	107660	.	-	.	ID=Dca25300.1.exon2;Parent=Dca25300.1
scaffold251	Augustus	exon	107748	108480	.	-	.	ID=Dca25300.1.exon3;Parent=Dca25300.1
scaffold251	Augustus	exon	108556	109134	.	-	.	ID=Dca25300.1.exon4;Parent=Dca25300.1
scaffold251	Augustus	exon	110588	114149	.	-	.	ID=Dca25300.1.exon5;Parent=Dca25300.1
scaffold251	Augustus	exon	114597	114816	.	-	.	ID=Dca25300.1.exon6;Parent=Dca25300.1