Dca25430.1
Annotation
- 4-exons
- f-1
- sp|B9HSY9_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821821#unknown#0F0P0C
- Repeat List (scaffold2523)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25430.1 |
5 |
218 |
218 |
60.55 |
214 |
62 |
9e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HSY9_POPTR |
25 |
237 |
240 |
88.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25430.1 |
12 |
218 |
218 |
55.04 |
207 |
58 |
9e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0170800-01 |
30 |
235 |
239 |
86.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2523 |
Augustus |
mRNA |
34745 |
38572 |
. |
- |
. |
ID=Dca25430.1;Parent=Dca25430 |
| scaffold2523 |
Augustus |
exon |
34745 |
35068 |
. |
- |
. |
ID=Dca25430.1.exon1;Parent=Dca25430.1 |
| scaffold2523 |
Augustus |
exon |
35372 |
35428 |
. |
- |
. |
ID=Dca25430.1.exon2;Parent=Dca25430.1 |
| scaffold2523 |
Augustus |
exon |
35523 |
35627 |
. |
- |
. |
ID=Dca25430.1.exon3;Parent=Dca25430.1 |
| scaffold2523 |
Augustus |
exon |
38402 |
38572 |
. |
- |
. |
ID=Dca25430.1.exon4;Parent=Dca25430.1 |
