Carnation DB

Dca25517.1

Annotation

9-exons
f-1
sp|B9I6D3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_730096#GO:0008060;GO:0008270;GO:0032312#2F1P0C
AT1G08680.4 | Symbols: ZIGA4 | ARF GAP-like zinc finger-containing protein ZIGA4 | chr1:2762820-2768387 FORWARD LENGTH=651
Repeat List (scaffold2531)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25517.1	5	611	611	40.91	607	40	4e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9I6D3_POPTR	103	672	672	84.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25517.1	5	611	611	36.66	607	36	3e-62
Target_name	Start	End	Length	Cov(%)
AT1G08680.4	104	651	651	84.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2531	Augustus	mRNA	32859	37955	.	+	.	ID=Dca25517.1;Parent=Dca25517
scaffold2531	Augustus	exon	32859	32872	.	+	.	ID=Dca25517.1.exon1;Parent=Dca25517.1
scaffold2531	Augustus	exon	33103	33199	.	+	.	ID=Dca25517.1.exon2;Parent=Dca25517.1
scaffold2531	Augustus	exon	33370	33816	.	+	.	ID=Dca25517.1.exon3;Parent=Dca25517.1
scaffold2531	Augustus	exon	34445	35113	.	+	.	ID=Dca25517.1.exon4;Parent=Dca25517.1
scaffold2531	Augus-PASA	exon	35423	35539	.	+	.	ID=Dca25517.1.exon5;Parent=Dca25517.1
scaffold2531	Augus-PASA	exon	35890	36006	.	+	.	ID=Dca25517.1.exon6;Parent=Dca25517.1
scaffold2531	Augus-PASA	exon	36092	36172	.	+	.	ID=Dca25517.1.exon7;Parent=Dca25517.1
scaffold2531	Augustus	exon	36946	37181	.	+	.	ID=Dca25517.1.exon8;Parent=Dca25517.1
scaffold2531	Augustus	exon	37898	37955	.	+	.	ID=Dca25517.1.exon9;Parent=Dca25517.1