Dca25526.1
Annotation
- 4-exons
- f-1
- sp|Q9SJ83_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g04760#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2532)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25526.1 |
52 |
237 |
346 |
19.94 |
186 |
35 |
5e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJ83_ARATH |
25 |
206 |
631 |
28.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25526.1 |
158 |
239 |
346 |
8.38 |
82 |
35 |
4e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
449 |
531 |
857 |
9.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2532 |
Augustus |
mRNA |
21955 |
24387 |
. |
+ |
. |
ID=Dca25526.1;Parent=Dca25526 |
| scaffold2532 |
Augustus |
exon |
21955 |
22109 |
. |
+ |
. |
ID=Dca25526.1.exon1;Parent=Dca25526.1 |
| scaffold2532 |
Augustus |
exon |
22210 |
22512 |
. |
+ |
. |
ID=Dca25526.1.exon2;Parent=Dca25526.1 |
| scaffold2532 |
Augustus |
exon |
22706 |
22969 |
. |
+ |
. |
ID=Dca25526.1.exon3;Parent=Dca25526.1 |
| scaffold2532 |
Augustus |
exon |
24069 |
24387 |
. |
+ |
. |
ID=Dca25526.1.exon4;Parent=Dca25526.1 |
