Carnation DB

Dca25530.1

Annotation

5-exons
f-1
sp|B8A767_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_03168#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold2533)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25530.1	213	580	802	15.71	368	34	1e-60
Target_name	Start	End	Length	Cov(%)
sp\|B8A767_ORYSI	310	669	995	36.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25530.1	1	113	802	5.23	113	37	1e-15
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	62	174	857	13.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2533	Augustus	mRNA	11287	15031	.	+	.	ID=Dca25530.1;Parent=Dca25530
scaffold2533	Augustus	exon	11287	11633	.	+	.	ID=Dca25530.1.exon1;Parent=Dca25530.1
scaffold2533	Augustus	exon	11980	12220	.	+	.	ID=Dca25530.1.exon2;Parent=Dca25530.1
scaffold2533	Augustus	exon	12586	13424	.	+	.	ID=Dca25530.1.exon3;Parent=Dca25530.1
scaffold2533	Augustus	exon	13629	13946	.	+	.	ID=Dca25530.1.exon4;Parent=Dca25530.1
scaffold2533	Augustus	exon	14368	15031	.	+	.	ID=Dca25530.1.exon5;Parent=Dca25530.1