Carnation DB

Dca25549.1

Annotation

8-exons
f-1
sp|B9GTW2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_552769#GO:0005507;GO:0016491#2F0P0C
Os06t0678800-01 Similar to Pollen-specific protein NTP303 precursor.
Repeat List (scaffold2535)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25549.1	2	541	549	76.13	540	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GTW2_POPTR	4	543	545	99.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25549.1	23	541	549	71.03	519	75	0
Target_name	Start	End	Length	Cov(%)
Os06t0678800-01	21	540	543	95.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2535	Augustus	mRNA	21368	24446	.	+	.	ID=Dca25549.1;Parent=Dca25549
scaffold2535	Augustus	exon	21368	21511	.	+	.	ID=Dca25549.1.exon1;Parent=Dca25549.1
scaffold2535	Augustus	exon	21624	21733	.	+	.	ID=Dca25549.1.exon2;Parent=Dca25549.1
scaffold2535	Augustus	exon	22435	22705	.	+	.	ID=Dca25549.1.exon3;Parent=Dca25549.1
scaffold2535	Augustus	exon	22797	22899	.	+	.	ID=Dca25549.1.exon4;Parent=Dca25549.1
scaffold2535	Augustus	exon	23109	23454	.	+	.	ID=Dca25549.1.exon5;Parent=Dca25549.1
scaffold2535	Augustus	exon	23542	23907	.	+	.	ID=Dca25549.1.exon6;Parent=Dca25549.1
scaffold2535	Augustus	exon	24007	24085	.	+	.	ID=Dca25549.1.exon7;Parent=Dca25549.1
scaffold2535	Augustus	exon	24216	24446	.	+	.	ID=Dca25549.1.exon8;Parent=Dca25549.1