Dca25577.1
Annotation
- 3-exons
- f-1
- sp|B9HK05_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_803047#unknown#0F0P0C
- AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:2701448-2706910 FORWARD LENGTH=839
- Repeat List (scaffold2538)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25577.1 |
4 |
114 |
114 |
62.28 |
111 |
64 |
3e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HK05_POPTR |
648 |
758 |
802 |
13.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25577.1 |
12 |
114 |
114 |
53.5 |
103 |
59 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0677700-00 |
743 |
846 |
891 |
11.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2538 |
Augustus |
mRNA |
277 |
2284 |
. |
- |
. |
ID=Dca25577.1;Parent=Dca25577 |
| scaffold2538 |
Augustus |
exon |
277 |
393 |
. |
- |
. |
ID=Dca25577.1.exon1;Parent=Dca25577.1 |
| scaffold2538 |
Augustus |
exon |
1946 |
2058 |
. |
- |
. |
ID=Dca25577.1.exon2;Parent=Dca25577.1 |
| scaffold2538 |
Augustus |
exon |
2171 |
2284 |
. |
- |
. |
ID=Dca25577.1.exon3;Parent=Dca25577.1 |
