Carnation DB

Dca25583.1

Annotation

5-exons
f-1
sp|A0SVL7_POPCN#LIM domain protein WLIM2a#Populus canescens (Grey poplar) (Populus tremula x Populus alba)#Name=WLIM2a#GO:0008270#1F0P0C
Repeat List (scaffold2539)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25583.1	53	122	220	16.36	70	52	7e-15
Target_name	Start	End	Length	Cov(%)
sp\|A0SVL7_POPCN	3	72	189	37.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25583.1	52	143	220	18.63	92	45	1e-17
Target_name	Start	End	Length	Cov(%)
Os03t0266100-01	1	87	197	44.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2539	Augustus	mRNA	11959	13289	.	-	.	ID=Dca25583.1;Parent=Dca25583
scaffold2539	Augustus	exon	11959	12154	.	-	.	ID=Dca25583.1.exon1;Parent=Dca25583.1
scaffold2539	Augustus	exon	12329	12579	.	-	.	ID=Dca25583.1.exon2;Parent=Dca25583.1
scaffold2539	Augustus	exon	12890	12979	.	-	.	ID=Dca25583.1.exon3;Parent=Dca25583.1
scaffold2539	Augustus	exon	13069	13112	.	-	.	ID=Dca25583.1.exon4;Parent=Dca25583.1
scaffold2539	Augustus	exon	13208	13289	.	-	.	ID=Dca25583.1.exon5;Parent=Dca25583.1