Dca25624.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2542)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25624.1 |
46 |
166 |
166 |
39.75 |
121 |
54 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
467 |
589 |
1501 |
8.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25624.1 |
70 |
166 |
166 |
18.67 |
97 |
31 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
179 |
278 |
707 |
14.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2542 |
Augustus |
mRNA |
18207 |
20142 |
. |
+ |
. |
ID=Dca25624.1;Parent=Dca25624 |
| scaffold2542 |
Augustus |
exon |
18207 |
18341 |
. |
+ |
. |
ID=Dca25624.1.exon1;Parent=Dca25624.1 |
| scaffold2542 |
Augustus |
exon |
19777 |
20142 |
. |
+ |
. |
ID=Dca25624.1.exon2;Parent=Dca25624.1 |
