Dca25627.1
Annotation
- 3-exons
- f-1
- sp|Q2R091_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g43370#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold25420)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25627.1 |
5 |
419 |
420 |
41.9 |
415 |
40 |
1e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R091_ORYSJ |
803 |
1234 |
1966 |
21.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold25420 |
Augustus |
mRNA |
1 |
1454 |
. |
- |
. |
ID=Dca25627.1;Parent=Dca25627 |
| scaffold25420 |
Augustus |
exon |
1 |
565 |
. |
- |
. |
ID=Dca25627.1.exon1;Parent=Dca25627.1 |
| scaffold25420 |
Augustus |
exon |
687 |
1039 |
. |
- |
. |
ID=Dca25627.1.exon2;Parent=Dca25627.1 |
| scaffold25420 |
Augustus |
exon |
1112 |
1454 |
. |
- |
. |
ID=Dca25627.1.exon3;Parent=Dca25627.1 |
