Dca25629.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2543)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25629.1 |
15 |
443 |
443 |
65.68 |
429 |
67 |
3e-163
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
334 |
742 |
964 |
42.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25629.1 |
135 |
416 |
443 |
26.63 |
282 |
42 |
4e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
906 |
1183 |
1428 |
19.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2543 |
Augustus |
mRNA |
15344 |
17063 |
. |
+ |
. |
ID=Dca25629.1;Parent=Dca25629 |
| scaffold2543 |
Augustus |
exon |
15344 |
15398 |
. |
+ |
. |
ID=Dca25629.1.exon1;Parent=Dca25629.1 |
| scaffold2543 |
Augustus |
exon |
15787 |
17063 |
. |
+ |
. |
ID=Dca25629.1.exon2;Parent=Dca25629.1 |
