Carnation DB

Dca25678.1

Annotation

5-exons
f-1
sp|F6H8U4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g01770#GO:0005737;GO:0003743#1F0P1C
sp|D3UW28_SOLTU#Translation initiation factor eIF(Iso)4E#Solanum tuberosum (Potato)#Name=eIF(iso)4E#GO:0005737;GO:0003743#1F0P1C
Repeat List (scaffold255)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25678.1	19	201	201	74.12	183	82	1e-87
Target_name	Start	End	Length	Cov(%)
sp\|F6H8U4_VITVI	23	204	204	89.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25678.1	24	201	201	67.16	178	76	6e-80
Target_name	Start	End	Length	Cov(%)
Os10t0467600-01	29	206	207	85.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold255	Augus-PASA	mRNA	86621	88820	.	-	.	ID=Dca25678.1;Parent=Dca25678
scaffold255	Augus-PASA	exon	86621	86668	.	-	.	ID=Dca25678.1.exon1;Parent=Dca25678.1
scaffold255	Augus-PASA	exon	86760	86828	.	-	.	ID=Dca25678.1.exon2;Parent=Dca25678.1
scaffold255	Augus-PASA	exon	87744	87869	.	-	.	ID=Dca25678.1.exon3;Parent=Dca25678.1
scaffold255	Augus-PASA	exon	87981	88149	.	-	.	ID=Dca25678.1.exon4;Parent=Dca25678.1
scaffold255	Augus-PASA	exon	88627	88820	.	-	.	ID=Dca25678.1.exon5;Parent=Dca25678.1