Carnation DB

Dca25698.1

Annotation

6-exons
f-1
sp|A2I5F1_BETVU#Transposon-like protein#Beta vulgaris (Sugar beet)#unknown#unknown#0F0P0C
Repeat List (scaffold2550)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25698.1	1	241	352	37.78	241	54	9e-66
Target_name	Start	End	Length	Cov(%)
sp\|A2I5F1_BETVU	617	859	1399	17.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25698.1	1	241	352	23.29	241	31	6e-20
Target_name	Start	End	Length	Cov(%)
Os01t0768600-01	25	287	422	62.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2550	Augustus	mRNA	40529	43758	.	+	.	ID=Dca25698.1;Parent=Dca25698
scaffold2550	Augustus	exon	40529	40926	.	+	.	ID=Dca25698.1.exon1;Parent=Dca25698.1
scaffold2550	Augustus	exon	41009	41108	.	+	.	ID=Dca25698.1.exon2;Parent=Dca25698.1
scaffold2550	Augustus	exon	41209	41432	.	+	.	ID=Dca25698.1.exon3;Parent=Dca25698.1
scaffold2550	Augustus	exon	42928	43051	.	+	.	ID=Dca25698.1.exon4;Parent=Dca25698.1
scaffold2550	Augustus	exon	43283	43379	.	+	.	ID=Dca25698.1.exon5;Parent=Dca25698.1
scaffold2550	Augustus	exon	43643	43758	.	+	.	ID=Dca25698.1.exon6;Parent=Dca25698.1