Carnation DB

Dca25712.1

Annotation

6-exons
f-1
sp|B9NA32_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_586364#GO:0003723;GO:0006396#1F1P0C
AT4G31200.2 | Symbols: | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein | chr4:15162323-15164568 REVERSE LENGTH=650
Repeat List (scaffold2552)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25712.1	210	572	572	41.6	363	64	1e-122
Target_name	Start	End	Length	Cov(%)
sp\|B9NA32_POPTR	287	658	658	56.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25712.1	210	572	572	38.28	363	60	3e-104
Target_name	Start	End	Length	Cov(%)
AT4G31200.2	311	650	650	52.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2552	Augustus	mRNA	12701	19315	.	-	.	ID=Dca25712.1;Parent=Dca25712
scaffold2552	Augustus	exon	12701	13437	.	-	.	ID=Dca25712.1.exon1;Parent=Dca25712.1
scaffold2552	Augustus	exon	14106	14380	.	-	.	ID=Dca25712.1.exon2;Parent=Dca25712.1
scaffold2552	Augustus	exon	14815	14872	.	-	.	ID=Dca25712.1.exon3;Parent=Dca25712.1
scaffold2552	Augustus	exon	17977	18103	.	-	.	ID=Dca25712.1.exon4;Parent=Dca25712.1
scaffold2552	Augustus	exon	18578	18994	.	-	.	ID=Dca25712.1.exon5;Parent=Dca25712.1
scaffold2552	Augustus	exon	19211	19315	.	-	.	ID=Dca25712.1.exon6;Parent=Dca25712.1