Carnation DB

Dca25763.1

Annotation

7-exons
f-1
sp|B9MTI7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_739607#GO:0005488#1F0P0C
AT2G36810.1 | Symbols: | ARM repeat superfamily protein | chr2:15425739-15439462 REVERSE LENGTH=1716
Repeat List (scaffold2559)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25763.1	49	180	181	39.22	132	54	3e-40
Target_name	Start	End	Length	Cov(%)
sp\|B9MTI7_POPTR	907	1038	1076	12.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25763.1	50	177	181	33.7	128	48	5e-33
Target_name	Start	End	Length	Cov(%)
AT2G36810.1	1535	1661	1716	7.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2559	Augustus	mRNA	4053	6371	.	+	.	ID=Dca25763.1;Parent=Dca25763
scaffold2559	Augustus	exon	4053	4138	.	+	.	ID=Dca25763.1.exon1;Parent=Dca25763.1
scaffold2559	Augustus	exon	4430	4502	.	+	.	ID=Dca25763.1.exon2;Parent=Dca25763.1
scaffold2559	Augustus	exon	5500	5571	.	+	.	ID=Dca25763.1.exon3;Parent=Dca25763.1
scaffold2559	Augustus	exon	5724	5809	.	+	.	ID=Dca25763.1.exon4;Parent=Dca25763.1
scaffold2559	Augustus	exon	5897	5990	.	+	.	ID=Dca25763.1.exon5;Parent=Dca25763.1
scaffold2559	Augustus	exon	6174	6281	.	+	.	ID=Dca25763.1.exon6;Parent=Dca25763.1
scaffold2559	Augustus	exon	6345	6371	.	+	.	ID=Dca25763.1.exon7;Parent=Dca25763.1