Dca25768.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold256)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25768.1 |
17 |
530 |
533 |
50.09 |
514 |
52 |
6e-152
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
43 |
513 |
964 |
48.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25768.1 |
47 |
530 |
533 |
30.58 |
484 |
33 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
468 |
957 |
1401 |
34.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold256 |
Augustus |
mRNA |
2671 |
4352 |
. |
+ |
. |
ID=Dca25768.1;Parent=Dca25768 |
| scaffold256 |
Augustus |
exon |
2671 |
3814 |
. |
+ |
. |
ID=Dca25768.1.exon1;Parent=Dca25768.1 |
| scaffold256 |
Augustus |
exon |
3895 |
4352 |
. |
+ |
. |
ID=Dca25768.1.exon2;Parent=Dca25768.1 |
